HL_8UXA_068

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUUAAGUU

Length

8 nucleotides

Bulged bases

8UXA|1|AL|G|1141

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UXA_068 not in the Motif Atlas

Homologous match to HL_6CZR_096

Geometric discrepancy: 0.2242

The information below is about HL_6CZR_096

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

24

Unit IDs

8UXA|1|AL|A|1136
8UXA|1|AL|U|1137
8UXA|1|AL|U|1138
8UXA|1|AL|A|1139
8UXA|1|AL|A|1140
8UXA|1|AL|G|1141
8UXA|1|AL|U|1142
8UXA|1|AL|U|1143

Current chains

Chain AL

Small ribosomal subunit rRNA

Nearby chains

Chain Z

Small ribosomal subunit protein mS37

Chain o

Small ribosomal subunit protein uS9m