HL_8UXA_071

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUUUUU

Length

6 nucleotides

Bulged bases

8UXA|1|AL|U|1350, 8UXA|1|AL|U|1351, 8UXA|1|AL|U|1353

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UXA_071 not in the Motif Atlas

Geometric match to HL_8GLP_014

Geometric discrepancy: 0.1299

The information below is about HL_8GLP_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_12626.2

Basepair signature

cWW-F

Number of instances in this motif group

17

Unit IDs

8UXA|1|AL|A|1349
8UXA|1|AL|U|1350
8UXA|1|AL|U|1351
8UXA|1|AL|U|1352
8UXA|1|AL|U|1353
8UXA|1|AL|U|1354

Current chains

Chain AL

Small ribosomal subunit rRNA

Nearby chains

Chain AI

Small ribosomal subunit protein mS29