HL_8UXB_025
3D structure
- PDB id
- 8UXB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGCUAACGU
- Length
- 10 nucleotides
- Bulged bases
- 8UXB|1|1|U|958, 8UXB|1|1|C|961
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UXB_025 not in the Motif Atlas
- Geometric match to HL_7QR8_003
- Geometric discrepancy: 0.1898
- The information below is about HL_7QR8_003
- Detailed Annotation
- GNRA with extra cWH
- Broad Annotation
- GNRA with extra cWH
- Motif group
- HL_04259.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8UXB|1|1|G|954
8UXB|1|1|U|955
8UXB|1|1|G|956
8UXB|1|1|C|957
8UXB|1|1|U|958
8UXB|1|1|A|959
8UXB|1|1|A|960
8UXB|1|1|C|961
8UXB|1|1|G|962
8UXB|1|1|U|963
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S ribosomal protein L16
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