HL_8UXB_043

3D structure

PDB id

8UXB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UXB_043 not in the Motif Atlas

Geometric match to HL_4V9F_046

Geometric discrepancy: 0.0923

The information below is about HL_4V9F_046

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80709.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

11

Unit IDs

8UXB|1|1|C|1752
8UXB|1|1|G|1753
8UXB|1|1|A|1754
8UXB|1|1|A|1755
8UXB|1|1|G|1756

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L19