HL_8UZ3_006

3D structure

PDB id

8UZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

8UZ3|1|1|A|196, 8UZ3|1|1|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UZ3_006 not in the Motif Atlas

Geometric match to HL_4WF9_006

Geometric discrepancy: 0.156

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

8UZ3|1|1|G|194
8UZ3|1|1|A|195
8UZ3|1|1|A|196
8UZ3|1|1|A|197
8UZ3|1|1|C|198
8UZ3|1|1|A|199
8UZ3|1|1|U|200
8UZ3|1|1|C|201

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 5

Transfer RNA; tRNA

Chain L

50S ribosomal protein L15

Chain X

50S ribosomal protein L28