HL_8UZ3_039

3D structure

PDB id

8UZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

8UZ3|1|1|A|1614, 8UZ3|1|1|A|1616, 8UZ3|1|1|A|1618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UZ3_039 not in the Motif Atlas

Geometric match to HL_7A0S_040

Geometric discrepancy: 0.1616

The information below is about HL_7A0S_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_28592.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

12

Unit IDs

8UZ3|1|1|C|1612
8UZ3|1|1|G|1613
8UZ3|1|1|A|1614
8UZ3|1|1|C|1615
8UZ3|1|1|A|1616
8UZ3|1|1|C|1617
8UZ3|1|1|A|1618
8UZ3|1|1|G|1619

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain S

50S ribosomal protein L22

Chain d

50S ribosomal protein L34