HL_8UZ3_042

3D structure

PDB id

8UZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

8UZ3|1|1|U|1729, 8UZ3|1|1|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UZ3_042 not in the Motif Atlas

Geometric match to HL_7A0S_023

Geometric discrepancy: 0.3919

The information below is about HL_7A0S_023

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_51020.2

Basepair signature

cWW-cSW-F

Number of instances in this motif group

14

Unit IDs

8UZ3|1|1|C|1727
8UZ3|1|1|C|1728
8UZ3|1|1|U|1729
8UZ3|1|1|C|1730
8UZ3|1|1|G|1731
8UZ3|1|1|C|1732
8UZ3|1|1|G|1733

Current chains

Chain 1

23S ribosomal RNA

Nearby chains