HL_8UZ3_071

3D structure

PDB id

8UZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UZ3_071 not in the Motif Atlas

Geometric match to HL_6JQ5_004

Geometric discrepancy: 0.1896

The information below is about HL_6JQ5_004

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

8UZ3|1|2|G|158
8UZ3|1|2|G|159
8UZ3|1|2|A|160
8UZ3|1|2|A|161
8UZ3|1|2|A|162
8UZ3|1|2|C|163

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L19

Chain y

30S ribosomal protein S20