HL_8UZ3_080

3D structure

PDB id

8UZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8UZ3|1|2|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UZ3_080 not in the Motif Atlas

Geometric match to HL_4WF9_039

Geometric discrepancy: 0.306

The information below is about HL_4WF9_039

Detailed Annotation

GNRA with extra cWW

Broad Annotation

GNRA with extra cWW

Motif group

HL_87268.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8UZ3|1|2|G|462
8UZ3|1|2|U|463
8UZ3|1|2|U|464
8UZ3|1|2|A|465
8UZ3|1|2|A|466
8UZ3|1|2|U|467
8UZ3|1|2|A|468
8UZ3|1|2|C|469
8UZ3|1|2|C|470

Current chains

Chain 2

16S ribosomal RNA

Nearby chains