HL_8UZG_006

3D structure

PDB id

8UZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

8UZG|1|1|A|196, 8UZG|1|1|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UZG_006 not in the Motif Atlas

Geometric match to HL_4WF9_006

Geometric discrepancy: 0.1902

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

8UZG|1|1|G|194
8UZG|1|1|A|195
8UZG|1|1|A|196
8UZG|1|1|A|197
8UZG|1|1|C|198
8UZG|1|1|A|199
8UZG|1|1|U|200
8UZG|1|1|C|201

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 5

Transfer RNA; tRNA

Chain L

50S ribosomal protein L15

Chain X

50S ribosomal protein L28