HL_8UZG_074

3D structure

PDB id

8UZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGUAACGGC

Length

9 nucleotides

Bulged bases

8UZG|1|2|G|266

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UZG_074 not in the Motif Atlas

Geometric match to HL_5J7L_006

Geometric discrepancy: 0.2002

The information below is about HL_5J7L_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_84299.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

8UZG|1|2|G|259
8UZG|1|2|G|260
8UZG|1|2|U|261
8UZG|1|2|A|262
8UZG|1|2|A|263
8UZG|1|2|C|264
8UZG|1|2|G|265
8UZG|1|2|G|266
8UZG|1|2|C|267

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain v

30S ribosomal protein S17

Chain y

30S ribosomal protein S20