HL_8V03_080

3D structure

PDB id

8V03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8V03|1|2|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8V03_080 not in the Motif Atlas

Geometric match to HL_4V9F_043

Geometric discrepancy: 0.2317

The information below is about HL_4V9F_043

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8V03|1|2|G|462
8V03|1|2|U|463
8V03|1|2|U|464
8V03|1|2|A|465
8V03|1|2|A|466
8V03|1|2|U|467
8V03|1|2|A|468
8V03|1|2|C|469
8V03|1|2|C|470

Current chains

Chain 2

16S ribosomal RNA

Nearby chains