HL_8V1H_001
3D structure
- PDB id
- 8V1H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of human pre-mascRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.89 Å
Loop
- Sequence
- GGUGGC*C
- Length
- 7 nucleotides
- Bulged bases
- 8V1H|1|A|G|14, 8V1H|1|A|G|15
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8V1H_001 not in the Motif Atlas
- Geometric match to HL_5TBW_006
- Geometric discrepancy: 0.1055
- The information below is about HL_5TBW_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
8V1H|1|A|G|10
8V1H|1|A|G|11
8V1H|1|A|U|12
8V1H|1|A|G|14
8V1H|1|A|G|15
8V1H|1|A|C|16
*
8V1H|1|A|C|16
Current chains
- Chain A
- pre-mascRNA
Nearby chains
No other chains within 10ÅColoring options: