HL_8V9K_074
3D structure
- PDB id
- 8V9K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAUCCCG
- Length
- 7 nucleotides
- Bulged bases
- 8V9K|1|B|C|42
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8V9K_074 not in the Motif Atlas
- Homologous match to HL_7RQB_070
- Geometric discrepancy: 0.1263
- The information below is about HL_7RQB_070
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87939.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
8V9K|1|B|C|39
8V9K|1|B|A|40
8V9K|1|B|U|41
8V9K|1|B|C|42
8V9K|1|B|C|43
8V9K|1|B|C|44
8V9K|1|B|G|45
Current chains
- Chain B
- 5S Ribosomal RNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein bL31
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- Large ribosomal subunit protein uL5
- Chain Q
- Large ribosomal subunit protein uL18
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