HL_8V9K_098

3D structure

PDB id

8V9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CCUUGUG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8V9K_098 not in the Motif Atlas

Homologous match to HL_6CZR_094

Geometric discrepancy: 0.5947

The information below is about HL_6CZR_094

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8V9K|1|a|C|1009
8V9K|1|a|C|1010
8V9K|1|a|U|1011
8V9K|1|a|U|1012
8V9K|1|a|G|1013
8V9K|1|a|U|1014
8V9K|1|a|G|1015

Current chains

Chain a

16S Ribosomal RNA

Nearby chains