HL_8V9L_095
3D structure
- PDB id
- 8V9L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Composite structure 6)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GAUGCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 8V9L|1|a|G|953
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8V9L_095 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.1595
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8V9L|1|a|G|945
8V9L|1|a|A|946
8V9L|1|a|U|947
8V9L|1|a|G|948
8V9L|1|a|C|949
8V9L|1|a|A|950
8V9L|1|a|A|951
8V9L|1|a|C|952
8V9L|1|a|G|953
8V9L|1|a|C|954
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain i
- 30S ribosomal protein S9
- Chain j
- 30S ribosomal protein S10
- Chain y
- Transfer RNA; tRNA
Coloring options: