HL_8V9L_107
3D structure
- PDB id
- 8V9L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Composite structure 6)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CAGGGUAG
- Length
- 8 nucleotides
- Bulged bases
- 8V9L|1|y|G|18, 8V9L|1|y|G|19, 8V9L|1|y|U|20
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8V9L_107 not in the Motif Atlas
- Homologous match to HL_6PMO_003
- Geometric discrepancy: 0.1815
- The information below is about HL_6PMO_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8V9L|1|y|C|13
8V9L|1|y|A|14
8V9L|1|y|G|15
8V9L|1|y|G|18
8V9L|1|y|G|19
8V9L|1|y|U|20
8V9L|1|y|A|21
8V9L|1|y|G|22
Current chains
- Chain y
- pe/E deacylated phenylanaline-tRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: