HL_8VFT_031

3D structure

PDB id

8VFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 80S rabbit ribosome stalled by emetine with eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UGUAACAA

Length

8 nucleotides

Bulged bases

8VFT|1|5|U|2008, 8VFT|1|5|A|2009, 8VFT|1|5|A|2010

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VFT|1|5|U|2006
8VFT|1|5|G|2007
8VFT|1|5|U|2008
8VFT|1|5|A|2009
8VFT|1|5|A|2010
8VFT|1|5|C|2011
8VFT|1|5|A|2012
8VFT|1|5|A|2013

Current chains

Chain 5

28S rRNA

Nearby chains

Chain m

eL40

Chain s

uL10

Chain t

uL11

Chain v

eEF2