HL_8VFT_032
3D structure
- PDB id
- 8VFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translating 80S rabbit ribosome stalled by emetine with eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CAGUCGGCAGAGCGAGAAAGAGAGUGGCGCGGACGCUACG
- Length
- 40 nucleotides
- Bulged bases
- 8VFT|1|5|C|2094, 8VFT|1|5|C|2258, 8VFT|1|5|G|2259, 8VFT|1|5|C|2260, 8VFT|1|5|C|2266, 8VFT|1|5|U|2267, 8VFT|1|5|C|2269
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VFT|1|5|C|2087
8VFT|1|5|A|2088
8VFT|1|5|G|2089
8VFT|1|5|U|2090
8VFT|1|5|C|2091
8VFT|1|5|G|2092
8VFT|1|5|G|2093
8VFT|1|5|C|2094
8VFT|1|5|A|2095
8VFT|1|5|G|2096
8VFT|1|5|A|2097
8VFT|1|5|G|2098
8VFT|1|5|C|2099
8VFT|1|5|G|2100
8VFT|1|5|A|2101
8VFT|1|5|G|2102
8VFT|1|5|A|2103
8VFT|1|5|A|2104
8VFT|1|5|A|2105
8VFT|1|5|G|2106
8VFT|1|5|A|2107
8VFT|1|5|G|2108
8VFT|1|5|A|2109
8VFT|1|5|G|2110
8VFT|1|5|U|2111
8VFT|1|5|G|2112
8VFT|1|5|G|2113
8VFT|1|5|C|2258
8VFT|1|5|G|2259
8VFT|1|5|C|2260
8VFT|1|5|G|2261
8VFT|1|5|G|2262
8VFT|1|5|A|2263
8VFT|1|5|C|2264
8VFT|1|5|G|2265
8VFT|1|5|C|2266
8VFT|1|5|U|2267
8VFT|1|5|A|2268
8VFT|1|5|C|2269
8VFT|1|5|G|2270
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain C
- uL4
- Chain E
- eL6
- Chain F
- uL30
- Chain Q
- eL18
- Chain e
- eL32
- Chain r
- eL28
Coloring options: