HL_8VFT_094

3D structure

PDB id

8VFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 80S rabbit ribosome stalled by emetine with eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UC(E3C)ACUUUAAAUCCUUUAA

Length

19 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: E3C

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VFT|1|9|U|566
8VFT|1|9|C|567
8VFT|1|9|E3C|568
8VFT|1|9|A|569
8VFT|1|9|C|570
8VFT|1|9|U|571
8VFT|1|9|U|572
8VFT|1|9|U|573
8VFT|1|9|A|574
8VFT|1|9|A|575
8VFT|1|9|A|576
8VFT|1|9|U|577
8VFT|1|9|C|578
8VFT|1|9|C|579
8VFT|1|9|U|580
8VFT|1|9|U|581
8VFT|1|9|U|582
8VFT|1|9|A|583
8VFT|1|9|A|584

Current chains

Chain 9

18S rRNA

Nearby chains

Chain EE

eS4

Chain JJ

uS4

Chain YY

eS24