HL_8VFT_097

3D structure

PDB id

8VFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 80S rabbit ribosome stalled by emetine with eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

8VFT|1|9|U|890, 8VFT|1|9|U|893

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VFT|1|9|U|885
8VFT|1|9|A|886
8VFT|1|9|U|887
8VFT|1|9|U|888
8VFT|1|9|U|889
8VFT|1|9|U|890
8VFT|1|9|G|891
8VFT|1|9|U|892
8VFT|1|9|U|893
8VFT|1|9|G|894
8VFT|1|9|G|895
8VFT|1|9|U|896
8VFT|1|9|U|897
8VFT|1|9|U|898
8VFT|1|9|U|899
8VFT|1|9|C|900
8VFT|1|9|G|901

Current chains

Chain 9

18S rRNA

Nearby chains

Chain GG

eS6

Chain LL

uS17