HL_8VK7_009

3D structure

PDB id

8VK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX:50S-HflX-B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

UGUGAUACCGGGUAGGGGUUG

Length

21 nucleotides

Bulged bases

8VK7|1|A|U|285, 8VK7|1|A|U|301

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VK7|1|A|U|283
8VK7|1|A|G|284
8VK7|1|A|U|285
8VK7|1|A|G|286
8VK7|1|A|A|287
8VK7|1|A|U|288
8VK7|1|A|A|289
8VK7|1|A|C|290
8VK7|1|A|C|291
8VK7|1|A|G|292
8VK7|1|A|G|293
8VK7|1|A|G|294
8VK7|1|A|U|295
8VK7|1|A|A|296
8VK7|1|A|G|297
8VK7|1|A|G|298
8VK7|1|A|G|299
8VK7|1|A|G|300
8VK7|1|A|U|301
8VK7|1|A|U|302
8VK7|1|A|G|303

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain H

50S ribosomal protein L9