HL_8VKV_011

3D structure

PDB id

8VKV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation coupled complex (TTC-B) containing mRNA with a 33 nt long spacer, ops signal, RfaH, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGACCUUCGGGC

Length

12 nucleotides

Bulged bases

8VKV|1|D|U|209

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VKV|1|D|G|203
8VKV|1|D|G|204
8VKV|1|D|A|205
8VKV|1|D|C|206
8VKV|1|D|C|207
8VKV|1|D|U|208
8VKV|1|D|U|209
8VKV|1|D|C|210
8VKV|1|D|G|211
8VKV|1|D|G|212
8VKV|1|D|G|213
8VKV|1|D|C|214

Current chains

Chain D

16S rRNA

Nearby chains