HL_8VMA_002
3D structure
- PDB id
- 8VMA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of rhinovirus C15 RNA replication element sD-loop mutant in complex with Fab BL3-6
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.54 Å
Loop
- Sequence
- CACG
- Length
- 4 nucleotides
- Bulged bases
- 8VMA|1|C|A|38
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_52105.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 11
Unit IDs
8VMA|1|C|C|37
8VMA|1|C|A|38
8VMA|1|C|C|39
8VMA|1|C|G|40
Current chains
- Chain C
- RNA (88-MER)
Nearby chains
- Chain L
- Light Chain of Fab BL3-6
Coloring options: