HL_8VOP_011

3D structure

PDB id

8VOP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation coupled complex (TTC-B) containing mRNA with a 36 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

GGACCUUCGGGC

Length

12 nucleotides

Bulged bases

8VOP|1|D|U|209

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VOP|1|D|G|203
8VOP|1|D|G|204
8VOP|1|D|A|205
8VOP|1|D|C|206
8VOP|1|D|C|207
8VOP|1|D|U|208
8VOP|1|D|U|209
8VOP|1|D|C|210
8VOP|1|D|G|211
8VOP|1|D|G|212
8VOP|1|D|G|213
8VOP|1|D|C|214

Current chains

Chain D

16S rRNA

Nearby chains