HL_8VOP_023

3D structure

PDB id

8VOP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation coupled complex (TTC-B) containing mRNA with a 36 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

CCUUGAG

Length

7 nucleotides

Bulged bases

8VOP|1|D|U|842

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VOP|1|D|C|840
8VOP|1|D|C|841
8VOP|1|D|U|842
8VOP|1|D|U|843
8VOP|1|D|G|844
8VOP|1|D|A|845
8VOP|1|D|G|846

Current chains

Chain D

16S rRNA

Nearby chains

Chain C

30S ribosomal protein S18

Chain H

30S ribosomal protein S1