HL_8VOR_058

3D structure

PDB id

8VOR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 51 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUCAACCCGAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VOR|1|a|G|883
8VOR|1|a|U|884
8VOR|1|a|C|885
8VOR|1|a|A|886
8VOR|1|a|A|887
8VOR|1|a|C|888
8VOR|1|a|C|889
8VOR|1|a|C|890
8VOR|1|a|G|891
8VOR|1|a|A|892
8VOR|1|a|C|893

Current chains

Chain a

23S rRNA

Nearby chains

Chain X

30S ribosomal protein S13