HL_8VTU_095
3D structure
- PDB id
- 8VTU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-66, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GUUAAGUC
- Length
- 8 nucleotides
- Bulged bases
- 8VTU|1|1a|G|1094
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VTU_095 not in the Motif Atlas
- Homologous match to HL_4LFB_025
- Geometric discrepancy: 0.0974
- The information below is about HL_4LFB_025
- Detailed Annotation
- T-loop related
- Broad Annotation
- T-loop
- Motif group
- HL_63894.1
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 18
Unit IDs
8VTU|1|1a|G|1089
8VTU|1|1a|U|1090
8VTU|1|1a|U|1091
8VTU|1|1a|A|1092
8VTU|1|1a|A|1093
8VTU|1|1a|G|1094
8VTU|1|1a|U|1095
8VTU|1|1a|C|1096
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1b
- 30S ribosomal protein S2
- Chain 1g
- 30S ribosomal protein S7
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