3D structure

PDB id
8VTW (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.35 Å

Loop

Sequence
GCUUGUC
Length
7 nucleotides
Bulged bases (A, C, G, U)
271U, 271U
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_34168.3
Basepair signature
cWW-cWW-F
Number of instances in this motif group
11

Unit IDs

8VTW|1|1A|G|271|||I
8VTW|1|1A|C|271|||J
8VTW|1|1A|U|271|||K
8VTW|1|1A|U|271|||L
8VTW|1|1A|G|271|||M
8VTW|1|1A|U|271|||N
8VTW|1|1A|C|271|||O

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 11
50S ribosomal protein L28
Chain 1I
50S ribosomal protein L9

Coloring options:

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