HL_8VTW_118

3D structure

PDB id

8VTW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.35 Å

Loop

Sequence

CGG

Length

3 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8VTW_118 not in the Motif Atlas

Homologous match to HL_8VTW_016

Geometric discrepancy: 0.1984

The information below is about HL_8VTW_016

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76539.6

Basepair signature

cWW-F

Number of instances in this motif group

20

Unit IDs

8VTW|1|2A|C|543
8VTW|1|2A|G|545
8VTW|1|2A|G|549

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2V

50S ribosomal protein L21