8VU0 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_8VU0_001 | 1/C/13:23 | tRNA D-loop HL_04642.3 | ||
| HL_8VU0_002 | 1/C/33:38 | GNRA HL_34789.2 | ||
| HL_8VU0_003 | 1/C/53:61 | T-loop with 2 stacked bulged bases HL_33597.2 | ||
| HL_8VU0_004 | 1/D/13:23 | tRNA D-loop | homologous HL_8VU0_001 HL_04642.3 | |
| HL_8VU0_005 | 1/D/33:38 | GNRA | homologous HL_8VU0_002 HL_34789.2 | |
| HL_8VU0_006 | 1/D/53:61 | T-loop with 2 stacked bulged bases | homologous HL_8VU0_003 HL_33597.2 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_8VU0_001 | 1/C/7:10, 1/C/26:28, 1/C/43:49, 1/C/65:66 | tRNA junction J4_95067.1 | ||
| J4_8VU0_002 | 1/D/7:10, 1/D/26:28, 1/D/43:49, 1/D/65:66 | tRNA junction | homologous J4_3WQY_001 J4_95067.1 |
Problematic loops
No problematic loops
Coloring options: