HL_8VUP_103
3D structure
- PDB id
- 8VUP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CAGCCUGGUAG
- Length
- 11 nucleotides
- Bulged bases
- 8VUP|1|5|C|16, 8VUP|1|5|G|18, 8VUP|1|5|G|19, 8VUP|1|5|U|20, 8VUP|1|5|A|21
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VUP|1|5|C|13
8VUP|1|5|A|14
8VUP|1|5|G|15
8VUP|1|5|C|16
8VUP|1|5|C|17
8VUP|1|5|U|17|||A
8VUP|1|5|G|18
8VUP|1|5|G|19
8VUP|1|5|U|20
8VUP|1|5|A|21
8VUP|1|5|G|22
Current chains
- Chain 5
- tRNA^ProL (GGG)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: