HL_8VV4_024
3D structure
- PDB id
- 8VV4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GUGCUAACGU
- Length
- 10 nucleotides
- Bulged bases
- 8VV4|1|1|U|958, 8VV4|1|1|C|961
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VV4_024 not in the Motif Atlas
- Geometric match to HL_7QR8_003
- Geometric discrepancy: 0.1964
- The information below is about HL_7QR8_003
- Detailed Annotation
- GNRA with extra cWH
- Broad Annotation
- GNRA with extra cWH
- Motif group
- HL_04259.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8VV4|1|1|G|954
8VV4|1|1|U|955
8VV4|1|1|G|956
8VV4|1|1|C|957
8VV4|1|1|U|958
8VV4|1|1|A|959
8VV4|1|1|A|960
8VV4|1|1|C|961
8VV4|1|1|G|962
8VV4|1|1|U|963
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 5S ribosomal RNA; 5S rRNA
- Chain M
- 50S ribosomal protein L16
Coloring options: