HL_8VV4_050
3D structure
- PDB id
- 8VV4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUAAAGAGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 8VV4|1|1|A|2268, 8VV4|1|1|C|2275
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VV4_050 not in the Motif Atlas
- Geometric match to HL_9DFE_052
- Geometric discrepancy: 0.0777
- The information below is about HL_9DFE_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.1
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
8VV4|1|1|C|2264
8VV4|1|1|U|2265
8VV4|1|1|A|2266
8VV4|1|1|A|2267
8VV4|1|1|A|2268
8VV4|1|1|G|2269
8VV4|1|1|A|2270
8VV4|1|1|G|2271
8VV4|1|1|U|2272
8VV4|1|1|A|2273
8VV4|1|1|A|2274
8VV4|1|1|C|2275
8VV4|1|1|G|2276
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain M
- 50S ribosomal protein L16
- Chain W
- Large ribosomal subunit protein bL27
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