HL_8VVQ_065

3D structure

PDB id

8VVQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AGACAUGACAUCGUUU

Length

16 nucleotides

Bulged bases

8VVQ|1|WA|A|3949

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVQ|1|WA|A|3947
8VVQ|1|WA|G|3948
8VVQ|1|WA|A|3949
8VVQ|1|WA|C|3950
8VVQ|1|WA|A|3951
8VVQ|1|WA|U|3952
8VVQ|1|WA|G|3953
8VVQ|1|WA|A|3954
8VVQ|1|WA|C|4063
8VVQ|1|WA|A|4064
8VVQ|1|WA|U|4065
8VVQ|1|WA|C|4066
8VVQ|1|WA|G|4067
8VVQ|1|WA|U|4068
8VVQ|1|WA|U|4069
8VVQ|1|WA|U|4070

Current chains

Chain WA

28S rRNA

Nearby chains

Chain BB

S3A

Chain HA

L36