HL_8VVQ_083

3D structure

PDB id

8VVQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state of elongation inhibitor-treated mammalian ribosomes obtained from merged datasets

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGGAAAGGGG

Length

10 nucleotides

Bulged bases

8VVQ|1|WA|A|4912, 8VVQ|1|WA|A|4913, 8VVQ|1|WA|G|4915, 8VVQ|1|WA|G|4916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVQ|1|WA|C|4908
8VVQ|1|WA|G|4909
8VVQ|1|WA|G|4910
8VVQ|1|WA|A|4911
8VVQ|1|WA|A|4912
8VVQ|1|WA|A|4913
8VVQ|1|WA|G|4914
8VVQ|1|WA|G|4915
8VVQ|1|WA|G|4916
8VVQ|1|WA|G|4917

Current chains

Chain WA

28S rRNA

Nearby chains

Chain B

uL3

Chain N

uL13