HL_8VVR_032
3D structure
- PDB id
- 8VVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CCUCAG
- Length
- 6 nucleotides
- Bulged bases
- 8VVR|1|WA|C|1678, 8VVR|1|WA|A|1681
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VVR_032 not in the Motif Atlas
- Homologous match to HL_9H3G_028
- Geometric discrepancy: 0.239
- The information below is about HL_9H3G_028
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_27530.3
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 11
Unit IDs
8VVR|1|WA|C|1677
8VVR|1|WA|C|1678
8VVR|1|WA|U|1679
8VVR|1|WA|C|1680
8VVR|1|WA|A|1681
8VVR|1|WA|G|1682
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain AA
- L29
- Chain NA
- eL42
- Chain Z
- uL15
Coloring options: