HL_8VVS_072
3D structure
- PDB id
- 8VVS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUGGGUUUUA
- Length
- 11 nucleotides
- Bulged bases
- 8VVS|1|WA|U|4356
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VVS_072 not in the Motif Atlas
- Geometric match to HL_7JRT_001
- Geometric discrepancy: 0.3355
- The information below is about HL_7JRT_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_36265.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
8VVS|1|WA|U|4354
8VVS|1|WA|U|4355
8VVS|1|WA|U|4356
8VVS|1|WA|G|4357
8VVS|1|WA|G|4358
8VVS|1|WA|G|4359
8VVS|1|WA|U|4360
8VVS|1|WA|U|4361
8VVS|1|WA|U|4362
8VVS|1|WA|U|4363
8VVS|1|WA|A|4364
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain HA
- L36
- Chain K
- eL13
- Chain NA
- eL42
- Chain Z
- uL15
Coloring options: