HL_8VVT_002
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UAACCA
- Length
- 6 nucleotides
- Bulged bases
- 8VVT|1|WA|C|72
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VVT_002 not in the Motif Atlas
- Geometric match to HL_8P9A_114
- Geometric discrepancy: 0.158
- The information below is about HL_8P9A_114
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_51020.2
- Basepair signature
- cWW-cSW-F
- Number of instances in this motif group
- 14
Unit IDs
8VVT|1|WA|U|68
8VVT|1|WA|A|69
8VVT|1|WA|A|70
8VVT|1|WA|C|71
8VVT|1|WA|C|72
8VVT|1|WA|A|73
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain HA
- L36
- Chain K
- eL13
- Chain M
- L15
- Chain Z
- uL15
Coloring options: