Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_8VVT_0011/WA/37:44No text annotation
geometric
HL_8P9A_113
HL_48677.1
HL_8VVT_0021/WA/68:73No text annotation
geometric
HL_8P9A_114
HL_51020.2
HL_8VVT_0031/WA/89:95No text annotation
geometric
HL_9DFE_007
HL_76371.2
HL_8VVT_0041/WA/131:137No text annotation
HL_8VVT_0051/WA/204:211T-loop with 1 bulged base
geometric
HL_8P9A_117
HL_13999.2
HL_8VVT_0061/WA/222:226No text annotation
geometric
HL_5J7L_143
NA
HL_8VVT_0071/WA/230:238T-loop with unstacked turn
geometric
HL_5J7L_144
NA
HL_8VVT_0081/WA/289:298T-loop related
geometric
HL_8CRE_219
HL_63894.2
HL_8VVT_0091/WA/314:323No text annotation
geometric
HL_8CRE_009
NA
HL_8VVT_0101/WA/368:373GNRA
geometric
HL_8CRE_029
NA
HL_8VVT_0111/WA/393:398GNRA
geometric
HL_4OQU_001
HL_34789.2
HL_8VVT_0141/WA/967:975No text annotation
HL_8VVT_0151/WA/1323:1332T-loop with 2 stacked bulged bases
geometric
HL_8CRE_013
NA
HL_8VVT_0161/WA/1370:1379No text annotation
HL_8VVT_0171/WA/1395:1400GNRA
geometric
HL_8CRE_015
NA
HL_8VVT_0181/WA/1442:1453No text annotation
HL_8VVT_0191/WA/1484:1491No text annotation
HL_8VVT_0201/WA/1566:1571GNRA
geometric
HL_7ENI_001
HL_34789.2
HL_8VVT_0211/WA/1598:1607No text annotation
geometric
HL_8CRE_019
NA
HL_8VVT_0221/WA/1632:1640No text annotation
geometric
HL_8P9A_133
HL_92598.1
HL_8VVT_0231/WA/1680:1685No text annotation
HL_8VVT_0251/WA/1821:1828No text annotation
HL_8VVT_0261/WA/1869:1875GNRA
geometric
HL_8CRE_024
NA
HL_8VVT_0271/WA/1891:1898No text annotation
geometric
HL_8P9A_138
HL_47171.1
HL_8VVT_0281/WA/1983:1993No text annotation
geometric
HL_5D8H_001
HL_20174.1
HL_8VVT_0291/WA/2011:2018GNRA wlth tandem sheared
geometric
HL_8CRE_027
NA
HL_8VVT_0301/WA/2092:2275No text annotation
HL_8VVT_0311/WA/2322:2327GNRA
geometric
HL_8CRE_029
NA
HL_8VVT_0321/WA/2381:2389T-loop with 2 stacked bulged bases
geometric
HL_8CRE_030
NA
HL_8VVT_0331/WA/2425:2431Pseudoknot geometry with 3' bulge
geometric
HL_9DFE_036
HL_49081.1
HL_8VVT_0341/WA/2463:2468GNRA variation
geometric
HL_8CRE_032
NA
HL_8VVT_0361/WA/2528:2537No text annotation
geometric
HL_8CRE_034
NA
HL_8VVT_0381/WA/2583:2588GNRA
geometric
HL_8CRE_035
NA
HL_8VVT_0391/WA/2629:2637Pseudoknot geometry
geometric
HL_8P9A_148
HL_22758.1
HL_8VVT_0401/WA/2669:2675Other HL
geometric
HL_4V9F_039
HL_67772.1
HL_8VVT_0411/WA/2710:2715No text annotation
geometric
HL_9BZC_001
HL_89167.2
HL_8VVT_0421/WA/2743:2747No text annotation
geometric
HL_6LTU_001
HL_90436.2
HL_8VVT_0431/WA/2797:2804No text annotation
geometric
HL_8P9A_152
HL_28592.1
HL_8VVT_0441/WA/2815:2821GNRA
geometric
HL_8P9A_153
HL_34789.2
HL_8VVT_0451/WA/2877:2882UNCG
geometric
HL_8CRE_042
NA
HL_8VVT_0461/WA/2906:3603No text annotation
HL_8VVT_0471/WA/3619:3623No text annotation
HL_8VVT_0481/WA/3644:3654No text annotation
geometric
HL_8CRE_044
NA
HL_8VVT_0491/WA/3673:3679GNRA
geometric
HL_8CRE_045
NA
HL_8VVT_0501/WA/3729:3734GNRA
geometric
HL_8CRE_046
NA
HL_8VVT_0511/WA/3762:3772No text annotation
geometric
HL_8CRE_047
NA
HL_8VVT_0521/WA/3801:3809No text annotation
geometric
HL_8CRE_048
NA
HL_8VVT_0531/WA/3878:3887No text annotation
geometric
HL_8CRE_049
NA
HL_8VVT_0551/WA/4198:4206No text annotation
geometric
HL_8P9A_165
HL_11974.2
HL_8VVT_0561/WA/4215:4227No text annotation
geometric
HL_8CRE_054
NA
HL_8VVT_0571/WA/4255:4263No text annotation
geometric
HL_4V9F_057
HL_02452.1
HL_8VVT_0581/WA/4275:4282Pseudoknot geometry
geometric
HL_7A0S_055
HL_52651.2
HL_8VVT_0591/WA/4306:4314No text annotation
geometric
HL_8CRE_057
NA
HL_8VVT_0601/WA/4326:4331GNRA
geometric
HL_8CRE_058
NA
HL_8VVT_0611/WA/4357:4367No text annotation
geometric
HL_7JRT_001
HL_36265.1
HL_8VVT_0621/WA/4422:4430No text annotation
geometric
HL_5J7L_193
NA
HL_8VVT_0631/WA/4479:4486GNRA variation
geometric
HL_8CRE_061
NA
HL_8VVT_0641/WA/4502:4508No text annotation
geometric
HL_8CRE_062
NA
HL_8VVT_0651/WA/4545:4550GNRA
geometric
HL_9DFE_061
HL_34789.2
HL_8VVT_0661/WA/4608:4613GNRA
geometric
HL_8ITS_001
HL_34789.2
HL_8VVT_0671/WA/4651:4656Ribsomal LSU H95
geometric
HL_5J7L_198
NA
HL_8VVT_0681/WA/4693:4707No text annotation
geometric
HL_8CRE_066
NA
HL_8VVT_0691/WA/4911:4920No text annotation
HL_8VVT_0701/WA/4980:4988No text annotation
geometric
HL_5J7L_201
NA
HL_8VVT_0721/XA/32:45No text annotation
geometric
HL_8OI5_068
HL_01182.1
HL_8VVT_0731/XA/36:41No text annotation
geometric
HL_8OI5_069
HL_59381.2
HL_8VVT_0741/XA/86:91GNRA
geometric
HL_5FJC_002
HL_34789.2
HL_8VVT_0751/YA/47:56Pseudoknot with intercalation
geometric
HL_4V9F_001
HL_17803.1
HL_8VVT_0761/YA/107:112No text annotation
geometric
HL_7VTI_001
HL_89167.2
HL_8VVT_0771/YA/121:129No text annotation
HL_8VVT_0781/ZA/7:17No text annotation
geometric
HL_8CRE_191
HL_73535.1
HL_8VVT_0801/ZA/156:162GNRA related
geometric
HL_8CRE_193
HL_34789.2
HL_8VVT_0821/ZA/288:295T-loop with 1 bulged base
geometric
HL_8CRE_196
HL_67772.1
HL_8VVT_0831/ZA/377:387No text annotation
HL_8VVT_0841/ZA/416:421GNRA variation
geometric
HL_8CRE_199
HL_34789.2
HL_8VVT_0851/ZA/441:452No text annotation
geometric
HL_8CRE_200
HL_86432.1
HL_8VVT_0861/ZA/462:467UNCG
geometric
HL_8P9A_200
HL_61337.2
HL_8VVT_0871/ZA/498:504No text annotation
geometric
HL_8CRE_202
HL_89167.2
HL_8VVT_0891/ZA/565:585No text annotation
HL_8VVT_0901/ZA/618:623No text annotation
geometric
HL_8CRE_205
HL_93535.2
HL_8VVT_0911/ZA/820:828No text annotation
geometric
HL_8CRE_207
HL_11974.2
HL_8VVT_0921/ZA/885:901No text annotation
HL_8VVT_0931/ZA/957:966No text annotation
geometric
HL_8P9A_209
HL_38491.2
HL_8VVT_0941/ZA/994:999GNRA
geometric
HL_8CRE_211
HL_34789.2
HL_8VVT_0951/ZA/1054:1064No text annotation
geometric
HL_8CRE_212
HL_38491.2
HL_8VVT_0971/ZA/1141:1146GNRA
geometric
HL_8CRE_214
HL_34789.2
HL_8VVT_0981/ZA/1178:1183GNRA
geometric
HL_8CRE_215
HL_34789.2
HL_8VVT_0991/ZA/1245:1254No text annotation
geometric
HL_8CRE_216
HL_97521.1
HL_8VVT_1001/ZA/1295:1304GNRA wlth extra near cWW
geometric
HL_8P9A_216
HL_98423.2
HL_8VVT_1011/ZA/1353:1358GNRA
geometric
HL_8P9A_217
HL_34789.2
HL_8VVT_1021/ZA/1366:1373T-loop related
geometric
HL_8CRE_219
HL_63894.2
HL_8VVT_1031/ZA/1460:1466No text annotation
geometric
HL_8CRE_221
HL_76371.2
HL_8VVT_1041/ZA/1565:1570GNRA
geometric
HL_9DFE_061
HL_34789.2
HL_8VVT_1051/ZA/1614:1625No text annotation
HL_8VVT_1061/ZA/1658:1666T-loop with 1 bulged base
geometric
HL_8CRE_224
HL_61418.2
HL_8VVT_1071/ZA/1847:1852GNRA variation
geometric
HL_8P9A_225
HL_34789.2

Problematic loops

#loop idProblemSequence
HL_8VVT_012No text annotation
HL_8VVT_013No text annotation
HL_8VVT_024GNRA
HL_8VVT_035No text annotation
HL_8VVT_037GNRA variation
HL_8VVT_054No text annotation
HL_8VVT_071No text annotation
HL_8VVT_079No text annotation
HL_8VVT_081GNRA
HL_8VVT_088GNRA
HL_8VVT_096No text annotation

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_8VVT_0011/WA/6:7,
1/YA/149:151
Single bulged C
geometric
IL_7A0S_032
IL_05642.2
IL_8VVT_0021/WA/12:14,
1/YA/143:144
Single bulged U
geometric
IL_8P9A_232
IL_97561.2
IL_8VVT_0031/WA/16:18,
1/YA/139:141
Isolated non-canonical cWW pair
geometric
IL_1Y27_001
IL_01003.2
IL_8VVT_0041/WA/26:27,
1/WA/55:57
Single stack bend
geometric
IL_7A0S_005
IL_15011.2
IL_8VVT_0051/WA/30:37,
1/WA/44:52
9x8 Sarcin-Ricin; G-bulge
geometric
IL_4WF9_008
IL_93502.1
IL_8VVT_0061/WA/81:88,
1/WA/96:102
8x7 Sarcin-Ricin; G-bulge
geometric
IL_8CRE_006
NA
IL_8VVT_0071/WA/118:121,
1/WA/152:153
Stack outside cWW
geometric
IL_5J7L_268
NA
IL_8VVT_0081/WA/118:122,
1/WA/147:153
No text annotation
IL_8VVT_0091/WA/121:122,
1/WA/147:152
No text annotation
geometric
IL_4V9F_009
IL_10396.1
IL_8VVT_0101/WA/125:126,
1/WA/142:144
Single bulged C
geometric
IL_1DQF_001
NA
IL_8VVT_0111/WA/168:173,
1/WA/263:267
No text annotation
IL_8VVT_0121/WA/180:189,
1/WA/252:256
No text annotation
IL_8VVT_0131/WA/195:196,
1/WA/244:246
Single bulged C
geometric
IL_6XKO_001
IL_05642.2
IL_8VVT_0141/WA/199:201,
1/WA/214:215
No text annotation
geometric
IL_8CRE_013
NA
IL_8VVT_0151/WA/339:342,
1/YA/32:33
Minor groove platform, major groove intercalation
geometric
IL_1U9S_005
IL_55206.1
IL_8VVT_0161/WA/348:350,
1/YA/25:26
Single bulged A
geometric
IL_8CRE_014
NA
IL_8VVT_0171/WA/387:390,
1/WA/401:414
No text annotation
geometric
IL_8CRE_015
NA
IL_8VVT_0181/WA/415:421,
1/YA/13:19
Triple sheared with non-canonical cWW
geometric
IL_5J7L_245
NA
IL_8VVT_0191/WA/443:446,
1/WA/1306:1310
No text annotation
IL_8VVT_0201/WA/448:450,
1/WA/1303:1304
Single bulged C
geometric
IL_7KGA_001
IL_05642.2
IL_8VVT_0211/WA/458:460,
1/WA/696:699
Isolated non-canonical cWW contact
geometric
IL_5UNE_001
IL_87720.1
IL_8VVT_0221/WA/462:464,
1/WA/692:694
Isolated non-canonical cWW pair
geometric
IL_8P9A_270
IL_01003.2
IL_8VVT_0231/WA/466:472,
1/WA/683:690
No text annotation
IL_8VVT_0241/WA/481:483,
1/WA/673:674
Single bulged C
geometric
IL_9DFE_034
IL_05642.2
IL_8VVT_0251/WA/483:486,
1/WA/672:673
Multiple bulged bases
geometric
IL_1R3E_001
IL_05670.1
IL_8VVT_0261/WA/488:489,
1/WA/666:670
Multiple bulged bases
geometric
IL_1R3E_001
IL_05670.1
IL_8VVT_0271/WA/492:494,
1/WA/662:663
No text annotation
IL_8VVT_0281/WA/498:500,
1/WA/657:658
Single bulged C
geometric
IL_3SN2_001
IL_05642.2
IL_8VVT_0291/WA/509:511,
1/WA/650:651
Single bulged A
geometric
IL_6WPI_001
IL_14190.2
IL_8VVT_0301/WA/710:711,
1/WA/1292:1294
Single bulged G
geometric
IL_4LFB_036
IL_28408.2
IL_8VVT_0311/WA/724:725,
1/WA/947:950
Multiple bulged bases
geometric
IL_7Q80_003
IL_05670.1
IL_8VVT_0321/WA/728:732,
1/WA/943:944
No text annotation
IL_8VVT_0331/WA/733:736,
1/WA/932:942
No text annotation
IL_8VVT_0341/WA/738:741,
1/WA/927:930
No text annotation
geometric
IL_5J7L_341
NA
IL_8VVT_0351/WA/747:754,
1/WA/913:921
No text annotation
geometric
IL_8P9A_248
IL_25001.1
IL_8VVT_0361/WA/1080:1082,
1/WA/1240:1242
Isolated non-canonical cWW pair
geometric
IL_3D0U_006
IL_01003.2
IL_8VVT_0371/WA/1088:1090,
1/WA/1219:1223
Isolated near basepair
geometric
IL_7A0S_030
IL_42997.5
IL_8VVT_0381/WA/1092:1093,
1/WA/1215:1217
Single bulged C
geometric
IL_3W3S_001
IL_05642.2
IL_8VVT_0401/WA/1179:1181,
1/WA/1192:1194
Isolated cWH basepair
geometric
IL_2R1S_002
IL_10892.2
IL_8VVT_0411/WA/1363:1366,
1/WA/1385:1388
No text annotation
IL_8VVT_0421/WA/1363:1367,
1/WA/1382:1388
No text annotation
IL_8VVT_0431/WA/1366:1367,
1/WA/1382:1385
Single bulged A
geometric
IL_4V9F_090
IL_73464.1
IL_8VVT_0441/WA/1431:1435,
1/WA/1460:1465
Triple sheared related
geometric
IL_4V9F_018
IL_67427.1
IL_8VVT_0451/WA/1437:1440,
1/WA/1455:1458
Double sheared
geometric
IL_4KZD_002
IL_58355.2
IL_8VVT_0461/WA/1472:1473,
1/WA/1501:1503
Single bulged A
geometric
IL_8P9A_252
IL_14190.2
IL_8VVT_0471/WA/1479:1481,
1/WA/1494:1495
Single stack bend
geometric
IL_7A0S_005
IL_15011.2
IL_8VVT_0481/WA/1525:1527,
1/WA/1660:1662
Isolated non-canonical cWW pair
geometric
IL_8P9A_255
IL_01003.2
IL_8VVT_0491/WA/1527:1531,
1/WA/1653:1660
No text annotation
geometric
IL_8P9A_256
IL_73855.1
IL_8VVT_0501/WA/1555:1556,
1/WA/1581:1583
Single bulged G
geometric
IL_4V9F_026
IL_28408.2
IL_8VVT_0511/WA/1556:1560,
1/WA/1577:1581
Triple sheared
geometric
IL_4V9F_027
IL_15190.2
IL_8VVT_0521/WA/1591:1594,
1/WA/1610:1612
No text annotation
geometric
IL_8CRE_034
NA
IL_8VVT_0531/WA/1595:1597,
1/WA/1608:1609
No text annotation
geometric
IL_8CRE_035
NA
IL_8VVT_0541/WA/1629:1631,
1/WA/1641:1645
No text annotation
geometric
IL_8CRE_036
NA
IL_8VVT_0551/WA/1676:1678,
1/WA/1687:1689
Isolated non-canonical cWW pair
geometric
IL_8CRE_037
NA
IL_8VVT_0561/WA/1691:1693,
1/WA/1853:1856
No text annotation
IL_8VVT_0571/WA/1699:1726,
1/WA/1846:1847
No text annotation
IL_8VVT_0581/WA/1728:1730,
1/WA/1843:1844
No text annotation
geometric
IL_8CRE_040
NA
IL_8VVT_0591/WA/1737:1742,
1/WA/1797:1802
No text annotation
IL_8VVT_0601/WA/1742:1743,
1/WA/1795:1797
Minor groove platform
geometric
IL_8CRE_042
NA
IL_8VVT_0611/WA/1744:1749,
1/WA/1791:1794
C-loop with bulged stacked A's
geometric
IL_8P9A_268
IL_16301.1
IL_8VVT_0621/WA/1751:1754,
1/WA/1786:1789
Tandem non-canonical cWW pairs
geometric
IL_8CRE_044
NA
IL_8VVT_0631/WA/1754:1756,
1/WA/1784:1786
Isolated non-canonical cWW pair
geometric
IL_8P9A_270
IL_01003.2
IL_8VVT_0641/WA/1757:1761,
1/WA/1781:1783
No text annotation
IL_8VVT_0661/WA/1819:1821,
1/WA/1828:1829
No text annotation
geometric
IL_8CRE_048
NA
IL_8VVT_0671/WA/1863:1865,
1/WA/1879:1881
Isolated non-canonical cWW pair
geometric
IL_8P9A_274
IL_01003.2
IL_8VVT_0691/WA/1910:1914,
1/WA/2072:2076
UAA/GAN
geometric
IL_8P9A_276
IL_08938.1
IL_8VVT_0701/WA/1916:1923,
1/WA/2069:2070
SSU/LSU pseudoknot
geometric
IL_9DFE_036
IL_11411.1
IL_8VVT_0711/WA/1923:1925,
1/WA/2068:2069
Single bulged G
geometric
IL_8TSV_002
IL_28408.2
IL_8VVT_0721/WA/1925:1927,
1/WA/2067:2068
No text annotation
IL_8VVT_0731/WA/1931:1938,
1/WA/2058:2063
No text annotation
geometric
IL_8CRE_054
NA
IL_8VVT_0741/WA/1938:1949,
1/WA/2043:2058
No text annotation
geometric
IL_8CRE_055
NA
IL_8VVT_0751/WA/1951:1953,
1/WA/2040:2041
Single bulged U
geometric
IL_8P9A_281
IL_97561.2
IL_8VVT_0761/WA/1962:1970,
1/WA/2027:2031
Kink-turn
geometric
IL_8CRE_057
NA
IL_8VVT_0771/WA/1978:1982,
1/WA/1994:1998
No text annotation
geometric
IL_8P9A_283
IL_16218.3
IL_8VVT_0781/WA/2006:2010,
1/WA/2019:2021
Major groove platform with extra cWW
geometric
IL_5D8H_003
IL_36931.2
IL_8VVT_0791/WA/2088:2090,
1/WA/2277:2278
Single bulged U
geometric
IL_8P9A_260
IL_97561.2
IL_8VVT_0801/WA/2295:2297,
1/WA/2347:2350
No text annotation
geometric
IL_8CRE_061
NA
IL_8VVT_0811/WA/2304:2306,
1/WA/2339:2340
Single bulged A
geometric
IL_3OXE_001
IL_14190.2
IL_8VVT_0821/WA/2307:2314,
1/WA/2334:2338
Kink-turn
geometric
IL_4V9F_048
IL_90775.2
IL_8VVT_0831/WA/2317:2319,
1/WA/2330:2331
Single bulged A
geometric
IL_7DLZ_001
NA
IL_8VVT_0841/WA/2363:2369,
1/WA/3863:3868
7x6 Sarcin-Ricin; G-bulge
geometric
IL_8CRE_065
NA
IL_8VVT_0851/WA/2420:2424,
1/WA/2432:2434
C-loop
geometric
IL_4MGN_001
IL_63596.12
IL_8VVT_0861/WA/2451:2455,
1/WA/2514:2519
UAA/GAN
geometric
IL_8CRE_067
NA
IL_8VVT_0871/WA/2482:2484,
1/WA/2504:2505
Minor groove platform
geometric
IL_8P9A_401
IL_34520.2
IL_8VVT_0881/WA/2547:2552,
1/WA/2777:2779
No text annotation
IL_8VVT_0891/WA/2554:2555,
1/WA/2773:2775
Single bulged U
geometric
IL_8TQX_001
IL_97561.2
IL_8VVT_0901/WA/2594:2598,
1/WA/2757:2761
Triple sheared
geometric
IL_8P9A_295
IL_15190.2
IL_8VVT_0911/WA/2618:2619,
1/WA/2729:2731
Single bulged A
geometric
IL_8UO6_001
IL_14190.2
IL_8VVT_0921/WA/2619:2620,
1/WA/2727:2729
Single stack bend
geometric
IL_8CRE_075
NA
IL_8VVT_0931/WA/2651:2653,
1/WA/2690:2693
No text annotation
IL_8VVT_0941/WA/2656:2658,
1/WA/2686:2687
Single bulged G
geometric
IL_7D7W_002
IL_28408.2
IL_8VVT_0951/WA/2661:2667,
1/WA/2677:2683
No text annotation
geometric
IL_8P9A_301
IL_93476.1
IL_8VVT_0961/WA/2709:2710,
1/WA/2715:2717
No text annotation
IL_8VVT_0971/WA/2837:2843,
1/WA/3855:3858
No text annotation
geometric
IL_8P9A_302
IL_89862.1
IL_8VVT_0981/WA/2849:2851,
1/WA/3847:3849
No text annotation
geometric
IL_8CRE_080
NA
IL_8VVT_0991/WA/2852:2855,
1/WA/3845:3846
Major groove platform; stack outside cWW
geometric
IL_8P9A_304
IL_74641.2
IL_8VVT_1001/WA/2852:2860,
1/WA/3842:3846
No text annotation
geometric
IL_8P9A_305
IL_80252.1
IL_8VVT_1011/WA/2855:2860,
1/WA/3842:3845
No text annotation
geometric
IL_8P9A_306
IL_28217.1
IL_8VVT_1021/WA/2872:2877,
1/WA/2882:2888
No text annotation
geometric
IL_8CRE_084
NA
IL_8VVT_1031/WA/2894:2896,
1/WA/3615:3617
Isolated non-canonical cWW pair
geometric
IL_8P9A_308
IL_01003.2
IL_8VVT_1041/WA/2901:2902,
1/WA/3607:3610
No text annotation
geometric
IL_8CRE_086
NA
IL_8VVT_1051/WA/3637:3638,
1/WA/3832:3834
Single bulged A
geometric
IL_4V9F_064
IL_14190.2
IL_8VVT_1061/WA/3665:3670,
1/WA/3682:3689
No text annotation
geometric
IL_8P9A_311
IL_14684.1
IL_8VVT_1071/WA/3705:3708,
1/WA/3754:3755
Minor groove platform, major groove intercalation
geometric
IL_8CRE_089
NA
IL_8VVT_1081/WA/3709:3710,
1/WA/3750:3753
Major groove intercalation
geometric
IL_8P9A_313
IL_71421.2
IL_8VVT_1091/WA/3713:3719,
1/WA/3744:3747
No text annotation
IL_8VVT_1101/WA/3720:3726,
1/WA/3737:3743
No text annotation
geometric
IL_8P9A_316
IL_65359.1
IL_8VVT_1111/WA/3785:3786,
1/WA/3816:3819
No text annotation
geometric
IL_8CRE_094
NA
IL_8VVT_1121/WA/3786:3797,
1/WA/3813:3816
No text annotation
geometric
IL_8CRE_095
NA
IL_8VVT_1131/WA/3900:3903,
1/WA/4568:4570
No text annotation
geometric
IL_8CRE_096
NA
IL_8VVT_1141/WA/3905:3907,
1/WA/4563:4566
No text annotation
geometric
IL_8CRE_097
NA
IL_8VVT_1151/WA/3918:3920,
1/WA/4393:4394
No text annotation
geometric
IL_8CRE_098
NA
IL_8VVT_1161/WA/3921:3922,
1/WA/4389:4392
Minor groove platform
geometric
IL_8P9A_322
IL_34520.2
IL_8VVT_1171/WA/3932:3934,
1/WA/4186:4189
Isolated tHS basepair with bulges
geometric
IL_5J7L_325
NA
IL_8VVT_1181/WA/4087:4093,
1/WA/4166:4169
No text annotation
geometric
IL_8CRE_106
NA
IL_8VVT_1201/WA/4196:4197,
1/WA/4207:4209
Single bulged A
geometric
IL_8P9A_325
IL_14190.2
IL_8VVT_1211/WA/4248:4250,
1/WA/4268:4272
No text annotation
geometric
IL_8CRE_108
NA
IL_8VVT_1221/WA/4296:4298,
1/WA/4322:4323
Single bulged A
geometric
IL_7MKY_001
IL_14190.2
IL_8VVT_1231/WA/4300:4303,
1/WA/4317:4320
Tandem non-canonical cWW pairs
geometric
IL_8CRE_440
IL_15225.2
IL_8VVT_1241/WA/4352:4355,
1/WA/4369:4370
Single stack bend
geometric
IL_8P9A_328
IL_15011.2
IL_8VVT_1251/WA/4405:4410,
1/WA/4444:4449
No text annotation
IL_8VVT_1261/WA/4410:4412,
1/WA/4440:4444
No text annotation
geometric
IL_8CRE_113
NA
IL_8VVT_1271/WA/4417:4421,
1/WA/4431:4435
Double sheared with non-canonical cWW
geometric
IL_8P9A_333
IL_87767.2
IL_8VVT_1281/WA/4458:4459,
1/WA/4531:4533
No text annotation
geometric
IL_8P9A_334
IL_46637.2
IL_8VVT_1291/WA/4461:4463,
1/WA/4525:4529
Isolated non-canonical cWW with bulges
geometric
IL_8CRE_116
NA
IL_8VVT_1301/WA/4463:4464,
1/WA/4522:4525
No text annotation
geometric
IL_8CRE_117
NA
IL_8VVT_1311/WA/4471:4473,
1/WA/4494:4496
Isolated non-canonical cWW pair
geometric
IL_4YHW_002
IL_01003.2
IL_8VVT_1321/WA/4471:4475,
1/WA/4490:4496
No text annotation
IL_8VVT_1331/WA/4473:4475,
1/WA/4490:4494
No text annotation
IL_8VVT_1341/WA/4500:4502,
1/WA/4508:4510
Isolated non-canonical cWW pair
geometric
IL_8CRE_121
NA
IL_8VVT_1351/WA/4542:4543,
1/WA/4552:4554
Single bulged A
geometric
IL_8CRE_122
NA
IL_8VVT_1361/WA/4585:4587,
1/WA/4726:4728
Isolated cWH basepair
geometric
IL_4E5C_001
IL_10892.2
IL_8VVT_1371/WA/4587:4590,
1/WA/4722:4726
Double sheared
geometric
IL_8P9A_342
IL_58355.2
IL_8VVT_1381/WA/4595:4597,
1/WA/4623:4625
Isolated non-canonical cWW pair
geometric
IL_5ZTM_002
IL_71625.2
IL_8VVT_1391/WA/4601:4608,
1/WA/4613:4619
8x7 Sarcin-Ricin; G-bulge
geometric
IL_8CRE_125
NA
IL_8VVT_1401/WA/4629:4634,
1/WA/4674:4678
No text annotation
IL_8VVT_1411/WA/4637:4642,
1/WA/4667:4671
No text annotation
geometric
IL_8P9A_346
IL_98200.1
IL_8VVT_1421/WA/4643:4645,
1/WA/4664:4666
Isolated cWH basepair
geometric
IL_3R1C_018
IL_10892.2
IL_8VVT_1431/WA/4646:4647,
1/WA/4660:4663
Multiple bulged bases
geometric
IL_5J7L_349
NA
IL_8VVT_1441/WA/4685:4690,
1/WA/4710:4715
UAA/GAN with extra cWW
geometric
IL_5J7L_350
NA
IL_8VVT_1451/WA/4744:4751,
1/WA/4959:4965
No text annotation
IL_8VVT_1461/WA/4761:4770,
1/WA/4874:4882
No text annotation
IL_8VVT_1471/WA/4774:4777,
1/WA/4868:4870
Major groove platform with extra cWW
geometric
IL_3PDR_004
IL_36931.2
IL_8VVT_1481/WA/4890:4893,
1/WA/4936:4939
Tandem non-canonical cWW pairs
geometric
IL_4XW0_002
IL_71194.2
IL_8VVT_1491/WA/4896:4901,
1/WA/4929:4933
No text annotation
IL_8VVT_1501/WA/4902:4908,
1/WA/4923:4928
Partly complementary
geometric
IL_7VYX_008
IL_71154.2
IL_8VVT_1511/WA/4977:4980,
1/WA/4988:4991
Tandem non-canonical cWW pairs
geometric
IL_8CRE_135
NA
IL_8VVT_1521/WA/4997:4999,
1/WA/5062:5064
Isolated non-canonical cWW pair
geometric
IL_3D0U_006
IL_01003.2
IL_8VVT_1531/WA/5001:5002,
1/WA/5058:5060
No text annotation
IL_8VVT_1541/WA/5005:5007,
1/WA/5050:5055
No text annotation
geometric
IL_8P9A_359
IL_00086.1
IL_8VVT_1551/WA/5008:5014,
1/WA/5044:5049
No text annotation
IL_8VVT_1561/WA/5017:5019,
1/WA/5040:5041
Single bulged C
geometric
IL_6XKO_001
IL_05642.2
IL_8VVT_1571/WA/5019:5022,
1/WA/5037:5040
Double sheared
geometric
IL_8CRE_141
NA
IL_8VVT_1581/XA/15:16,
1/XA/62:64
Single bulged C
geometric
IL_3W3S_001
IL_05642.2
IL_8VVT_1591/XA/21:27,
1/XA/52:57
No text annotation
geometric
IL_8OI5_135
IL_41504.1
IL_8VVT_1601/XA/28:29,
1/XA/48:51
Major groove minor groove platform; mini C-loop
geometric
IL_5J7L_357
NA
IL_8VVT_1611/XA/32:36,
1/XA/41:45
Symmetric double minor groove platform
geometric
IL_5NS3_002
IL_58103.12
IL_8VVT_1621/XA/71:78,
1/XA/98:104
8x7 Sarcin-Ricin; G-bulge
geometric
IL_7A0S_007
IL_62167.2
IL_8VVT_1631/XA/79:81,
1/XA/95:97
Isolated non-canonical cWW pair
geometric
IL_8CRE_473
IL_71625.2
IL_8VVT_1641/XA/82:85,
1/XA/92:94
Isolated non-canonical cWW pair
geometric
IL_8P9A_370
IL_01003.2
IL_8VVT_1651/YA/64:66,
1/YA/92:95
Isolated non-canonical cWW with bulges
geometric
IL_7ELQ_002
NA
IL_8VVT_1661/ZA/23:25,
1/ZA/649:651
Isolated non-canonical cWW pair
geometric
IL_5J7L_259
NA
IL_8VVT_1671/ZA/34:36,
1/ZA/519:521
Isolated non-canonical cWW pair
geometric
IL_5C5W_002
IL_01003.2
IL_8VVT_1681/ZA/37:40,
1/ZA/514:518
Double sheared
geometric
IL_4WF9_016
IL_58355.2
IL_8VVT_1691/ZA/41:47,
1/ZA/479:481
No text annotation
geometric
IL_8P9A_376
IL_88082.2
IL_8VVT_1701/ZA/49:51,
1/ZA/476:477
Minor groove platform
geometric
IL_8CRE_394
IL_34520.2
IL_8VVT_1711/ZA/57:62,
1/ZA/86:88
No text annotation
geometric
IL_8CRE_395
IL_61299.6
IL_8VVT_1731/ZA/108:110,
1/ZA/351:353
Isolated non-canonical cWW pair
geometric
IL_4LFB_069
IL_01003.2
IL_8VVT_1741/ZA/110:115,
1/ZA/348:351
No text annotation
IL_8VVT_1751/ZA/116:121,
1/ZA/343:347
No text annotation
geometric
IL_8CRE_399
IL_31545.1
IL_8VVT_1801/ZA/312:314,
1/ZA/336:337
Single bulged A
geometric
IL_8P9A_388
IL_14190.2
IL_8VVT_1811/ZA/317:319,
1/ZA/332:333
Single stack bend
geometric
IL_5J7L_044
NA
IL_8VVT_1831/ZA/359:364,
1/ZA/396:403
Kink-turn with non-sequential stacking
geometric
IL_5J7L_014
NA
IL_8VVT_1841/ZA/365:371,
1/ZA/393:395
No text annotation
IL_8VVT_1851/ZA/411:413,
1/ZA/424:429
No text annotation
IL_8VVT_1861/ZA/437:439,
1/ZA/454:456
Isolated cWH basepair
geometric
IL_8CRE_411
IL_10892.2
IL_8VVT_1871/ZA/459:461,
1/ZA/468:470
No text annotation
geometric
IL_8CRE_412
IL_42997.5
IL_8VVT_1881/ZA/487:489,
1/ZA/511:512
Single bulged U
geometric
IL_5J7L_017
NA
IL_8VVT_1891/ZA/491:495,
1/ZA/508:509
C-loop
geometric
IL_8CRE_414
IL_26900.1
IL_8VVT_1901/ZA/495:496,
1/ZA/506:508
No text annotation
geometric
IL_8CRE_415
IL_28408.2
IL_8VVT_1931/ZA/563:565,
1/ZA/585:592
No text annotation
geometric
IL_8CRE_418
IL_02511.1
IL_8VVT_1941/ZA/599:606,
1/ZA/636:637
SSU/LSU pseudoknot
geometric
IL_8CRE_421
IL_11411.1
IL_8VVT_1951/ZA/606:608,
1/ZA/635:636
Single bulged U
geometric
IL_4LFB_014
IL_97561.2
IL_8VVT_1961/ZA/610:617,
1/ZA/624:633
No text annotation
IL_8VVT_1971/ZA/663:665,
1/ZA/1162:1164
Isolated non-canonical cWW pair
geometric
IL_7QQP_008
IL_01003.2
IL_8VVT_1981/ZA/665:671,
1/ZA/1161:1162
No text annotation
geometric
IL_8CRE_424
IL_20847.1
IL_8VVT_1991/ZA/673:675,
1/ZA/1030:1032
Isolated non-canonical cWW pair
geometric
IL_8CRE_425
IL_01003.2
IL_8VVT_2001/ZA/676:680,
1/ZA/1025:1029
tSH-tHW-tHS
geometric
IL_8CRE_426
IL_05821.1
IL_8VVT_2031/ZA/802:803,
1/ZA/860:863
No text annotation
geometric
IL_8P9A_412
IL_73108.2
IL_8VVT_2041/ZA/805:807,
1/ZA/856:858
Isolated non-canonical cWW pair
geometric
IL_8P9A_308
IL_01003.2
IL_8VVT_2051/ZA/807:815,
1/ZA/849:856
No text annotation
IL_8VVT_2071/ZA/877:879,
1/ZA/907:909
Isolated non-canonical cWW pair
geometric
IL_8AF0_004
IL_01003.2
IL_8VVT_2081/ZA/922:923,
1/ZA/1019:1022
Major groove platform; stack outside cWW
geometric
IL_6N5P_003
IL_74641.2
IL_8VVT_2091/ZA/925:926,
1/ZA/1015:1017
Single bulged U
geometric
IL_7KVT_002
IL_97561.2
IL_8VVT_2101/ZA/928:931,
1/ZA/1010:1013
Tandem non-canonical cWW pairs
geometric
IL_5LQT_002
IL_15225.2
IL_8VVT_2111/ZA/931:935,
1/ZA/1007:1010
Tandem non-canonical cWW pairs
geometric
IL_8CRE_434
IL_15225.2
IL_8VVT_2121/ZA/942:945,
1/ZA/981:984
Tandem non-canonical cWW pairs
geometric
IL_8P9A_421
IL_15225.2
IL_8VVT_2131/ZA/952:956,
1/ZA/967:974
Kink-turn
geometric
IL_5J7L_035
NA
IL_8VVT_2141/ZA/1042:1047,
1/ZA/1071:1073
No text annotation
geometric
IL_8CRE_437
IL_31359.1
IL_8VVT_2151/ZA/1047:1051,
1/ZA/1067:1071
tSH-tHW-tHS
geometric
IL_8CRE_438
IL_05821.1
IL_8VVT_2161/ZA/1091:1093,
1/ZA/1152:1158
No text annotation
geometric
IL_8CRE_439
IL_82706.2
IL_8VVT_2171/ZA/1098:1104,
1/ZA/1128:1134
No text annotation
IL_8VVT_2181/ZA/1108:1110,
1/ZA/1123:1124
Minor groove platform
geometric
IL_8P9A_401
IL_34520.2
IL_8VVT_2191/ZA/1168:1175,
1/ZA/1186:1191
8x6 Sarcin-Ricin with inserted Y; G-bulge
geometric
IL_8CRE_442
IL_84044.1
IL_8VVT_2201/ZA/1203:1204,
1/ZA/1694:1696
Single bulged A
geometric
IL_8CRE_443
IL_14190.2
IL_8VVT_2211/ZA/1206:1208,
1/ZA/1691:1692
Single bulged G
geometric
IL_8P9A_430
IL_28408.2
IL_8VVT_2221/ZA/1214:1217,
1/ZA/1681:1685
C-loop
geometric
IL_8CRE_445
IL_63596.12
IL_8VVT_2231/ZA/1230:1232,
1/ZA/1526:1528
Isolated non-canonical cWW pair
geometric
IL_8P9A_432
IL_01003.2
IL_8VVT_2241/ZA/1235:1236,
1/ZA/1521:1523
Minor groove platform
geometric
IL_6DTD_003
IL_34520.2
IL_8VVT_2251/ZA/1270:1272,
1/ZA/1510:1512
Isolated non-canonical cWW pair
geometric
IL_5MWI_003
IL_01003.2
IL_8VVT_2261/ZA/1281:1287,
1/ZA/1314:1316
No text annotation
IL_8VVT_2271/ZA/1281:1294,
1/ZA/1305:1316
No text annotation
IL_8VVT_2281/ZA/1287:1294,
1/ZA/1305:1314
No text annotation
IL_8VVT_2291/ZA/1325:1327,
1/ZA/1502:1503
No text annotation
geometric
IL_8CRE_451
IL_97561.2
IL_8VVT_2301/ZA/1329:1335,
1/ZA/1492:1500
No text annotation
geometric
IL_8P9A_439
IL_99893.1
IL_8VVT_2311/ZA/1337:1338,
1/ZA/1488:1490
Single bulged A
geometric
IL_8CRE_455
IL_14190.2
IL_8VVT_2321/ZA/1347:1349,
1/ZA/1380:1382
Isolated cWH basepair
geometric
IL_8P9A_442
IL_10892.2
IL_8VVT_2331/ZA/1363:1365,
1/ZA/1374:1375
Minor groove platform
geometric
IL_8CRE_457
IL_34520.2
IL_8VVT_2341/ZA/1402:1405,
1/ZA/1441:1444
No text annotation
geometric
IL_8P9A_445
IL_78800.2
IL_8VVT_2351/ZA/1412:1413,
1/ZA/1427:1429
Single bulged G
geometric
IL_5J7L_019
NA
IL_8VVT_2361/ZA/1537:1539,
1/ZA/1594:1596
Isolated non-canonical cWW pair
geometric
IL_3SZX_002
IL_01003.2
IL_8VVT_2371/ZA/1541:1558,
1/ZA/1577:1592
No text annotation
IL_8VVT_2381/ZA/1560:1562,
1/ZA/1573:1575
Isolated non-canonical cWW pair
geometric
IL_8CRE_464
IL_71625.2
IL_8VVT_2391/ZA/1604:1610,
1/ZA/1629:1635
No text annotation
IL_8VVT_2401/ZA/1700:1702,
1/ZA/1833:1836
No text annotation
geometric
IL_4LFB_056
IL_18228.1
IL_8VVT_2411/ZA/1702:1705,
1/ZA/1829:1833
No text annotation
geometric
IL_8CRE_467
IL_25873.2
IL_8VVT_2421/ZA/1706:1708,
1/ZA/1826:1828
Isolated non-canonical cWW pair
geometric
IL_5J7L_363
NA
IL_8VVT_2431/ZA/1708:1711,
1/ZA/1822:1826
No text annotation
geometric
IL_1DUQ_001
NA
IL_8VVT_2441/ZA/1714:1716,
1/ZA/1817:1819
Isolated non-canonical cWW pair
geometric
IL_5ED1_002
IL_01003.2
IL_8VVT_2451/ZA/1717:1720,
1/ZA/1813:1816
Double sheared
geometric
IL_8CRE_471
IL_58355.2
IL_8VVT_2461/ZA/1720:1722,
1/ZA/1812:1813
No text annotation
geometric
IL_8CRE_472
IL_97561.2
IL_8VVT_2471/ZA/1729:1731,
1/ZA/1803:1805
Isolated non-canonical cWW pair
geometric
IL_8CRE_473
IL_71625.2
IL_8VVT_2481/ZA/1733:1736,
1/ZA/1798:1801
Double sheared
geometric
IL_8CRE_474
IL_58355.2
IL_8VVT_2491/ZA/1739:1741,
1/ZA/1793:1795
Isolated non-canonical cWW pair
geometric
IL_4E48_003
IL_01003.2
IL_8VVT_2501/ZA/1742:1746,
1/ZA/1788:1792
Triple sheared
geometric
IL_8CRE_476
IL_15190.2

Problematic loops

#loop idProblemSequence
IL_8VVT_039Single stack bend
IL_8VVT_065Isolated non-canonical cWW pair
IL_8VVT_068No text annotation
IL_8VVT_119Single stack bend
IL_8VVT_172No text annotation
IL_8VVT_176No text annotation
IL_8VVT_177Tandem non-canonical cWW pairs
IL_8VVT_178No text annotation
IL_8VVT_179No text annotation
IL_8VVT_182No text annotation
IL_8VVT_191Single bulged A
IL_8VVT_192No text annotation
IL_8VVT_201Isolated non-canonical cWW pair
IL_8VVT_202No text annotation
IL_8VVT_206No text annotation
IL_8VVT_251No text annotation
IL_8VVT_252Isolated non-canonical cWW pair
IL_8VVT_253Single stack bend

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_8VVT_0011/WA/112:116,
1/WA/155:160,
1/WA/275:278
No text annotation
J3_8VVT_0021/WA/351:367,
1/WA/374:379,
1/YA/21:24
No text annotation
geometric
J3_8P9A_045
J3_07616.1
J3_8VVT_0031/WA/380:387,
1/WA/414:415,
1/YA/19:20
No text annotation
geometric
J3_4V9F_011
J3_68715.1
J3_8VVT_0041/WA/380:390,
1/WA/401:415,
1/YA/19:20
No text annotation
geometric
J3_8CRE_006
NA
J3_8VVT_0051/WA/451:455,
1/WA/702:706,
1/WA/1298:1302
No text annotation
J3_8VVT_0061/WA/988:990,
1/WA/1076:1080,
1/WA/1242:1279
No text annotation
J3_8VVT_0071/WA/1536:1542,
1/WA/1627:1629,
1/WA/1645:1648
No text annotation
geometric
J3_8P9A_049
J3_46658.1
J3_8VVT_0081/WA/1550:1553,
1/WA/1585:1589,
1/WA/1614:1619
No text annotation
geometric
J3_8P9A_050
J3_21998.1
J3_8VVT_0091/WA/1731:1732,
1/WA/1807:1811,
1/WA/1837:1842
No text annotation
J3_8VVT_0101/WA/1974:1977,
1/WA/1999:2006,
1/WA/2021:2023
No text annotation
J3_8VVT_0111/WA/2398:2404,
1/WA/2810:2812,
1/WA/2824:2827
No text annotation
geometric
J3_8CRE_013
NA
J3_8VVT_0121/WA/2407:2410,
1/WA/2790:2796,
1/WA/2805:2807
No text annotation
geometric
J3_8P9A_054
J3_76012.1
J3_8VVT_0131/WA/2445:2450,
1/WA/2520:2524,
1/WA/2541:2542
No text annotation
geometric
J3_8P9A_055
J3_94309.1
J3_8VVT_0141/WA/2456:2461,
1/WA/2470:2481,
1/WA/2506:2513
No text annotation
J3_8VVT_0151/WA/2603:2607,
1/WA/2742:2743,
1/WA/2747:2752
No text annotation
geometric
J3_8CRE_018
NA
J3_8VVT_0161/WA/3942:3944,
1/WA/4079:4083,
1/WA/4173:4178
Kink-turn 3-way junction
geometric
J3_5J7L_044
NA
J3_8VVT_0171/WA/4096:4099,
1/WA/4119:4134,
1/WA/4160:4163
No text annotation
J3_8VVT_0181/WA/4233:4235,
1/WA/4336:4347,
1/WA/4375:4380
No text annotation
geometric
J3_8CRE_021
NA
J3_8VVT_0191/WA/4246:4248,
1/WA/4272:4274,
1/WA/4283:4288
No text annotation
geometric
J3_8P9A_062
J3_05327.1
J3_8VVT_0201/WA/4468:4471,
1/WA/4496:4498,
1/WA/4512:4518
No text annotation
geometric
J3_8CRE_023
NA
J3_8VVT_0211/WA/4754:4759,
1/WA/4884:4888,
1/WA/4941:4956
No text annotation
J3_8VVT_0221/WA/4975:4977,
1/WA/4991:4996,
1/WA/5065:5068
No text annotation
J3_8VVT_0231/XA/9:14,
1/XA/65:66,
1/XA/109:110
No text annotation
geometric
J3_8OI5_025
J3_26985.1
J3_8VVT_0241/YA/44:45,
1/YA/58:64,
1/YA/95:99
No text annotation
J3_8VVT_0251/ZA/40:41,
1/ZA/481:487,
1/ZA/512:514
No text annotation
geometric
J3_8CRE_071
J3_58657.1
J3_8VVT_0261/ZA/816:819,
1/ZA/829:831,
1/ZA/843:848
No text annotation
geometric
J3_8P9A_073
J3_97642.2
J3_8VVT_0271/ZA/938:941,
1/ZA/985:993,
1/ZA/1000:1004
No text annotation
geometric
J3_8P9A_074
J3_23895.1
J3_8VVT_0281/ZA/1094:1096,
1/ZA/1136:1140,
1/ZA/1147:1151
No text annotation
J3_8VVT_0291/ZA/1218:1221,
1/ZA/1645:1651,
1/ZA/1673:1680
No text annotation
geometric
J3_8P9A_076
J3_85722.1
J3_8VVT_0301/ZA/1225:1228,
1/ZA/1530:1532,
1/ZA/1638:1641
No text annotation
geometric
J3_8CRE_079
J3_44359.1
J3_8VVT_0311/ZA/1237:1244,
1/ZA/1255:1266,
1/ZA/1516:1520
No text annotation
geometric
J3_8CRE_080
J3_88451.1
J3_8VVT_0321/ZA/1272:1277,
1/ZA/1320:1324,
1/ZA/1504:1510
No text annotation
geometric
J3_8CRE_081
J3_87797.2
J3_8VVT_0331/ZA/1340:1345,
1/ZA/1384:1389,
1/ZA/1481:1486
No text annotation
J3_8VVT_0341/ZA/1350:1351,
1/ZA/1360:1363,
1/ZA/1375:1379
No text annotation
geometric
J3_8CRE_083
J3_76043.4
J3_8VVT_0351/ZA/1391:1399,
1/ZA/1447:1456,
1/ZA/1470:1479
No text annotation
J3_8VVT_0361/ZA/1532:1536,
1/ZA/1597:1604,
1/ZA/1635:1638
No text annotation
geometric
J3_8CRE_086
J3_03192.1
J4_8VVT_0011/WA/111:112,
1/WA/278:283,
1/WA/304:310,
1/WA/327:330
No text annotation
J4_8VVT_0021/WA/196:199,
1/WA/215:222,
1/WA/226:228,
1/WA/240:244
No text annotation
J4_8VVT_0031/WA/713:714,
1/WA/960:966,
1/WA/976:983,
1/WA/1284:1290
No text annotation
J4_8VVT_0041/WA/2370:2376,
1/WA/2394:2396,
1/WA/2829:2834,
1/WA/3861:3862
No text annotation
J4_8VVT_0051/WA/2411:2415,
1/WA/2439:2444,
1/WA/2543:2544,
1/WA/2782:2789
No text annotation
J4_8VVT_0061/WA/2556:2560,
1/WA/2577:2581,
1/WA/2590:2594,
1/WA/2761:2772
No text annotation
J4_8VVT_0071/WA/2623:2624,
1/WA/2642:2647,
1/WA/2697:2703,
1/WA/2723:2724
No text annotation
J4_8VVT_0081/WA/3639:3643,
1/WA/3655:3659,
1/WA/3695:3699,
1/WA/3826:3831
No text annotation
J4_8VVT_0091/WA/3701:3703,
1/WA/3757:3758,
1/WA/3776:3785,
1/WA/3819:3824
No text annotation
J4_8VVT_0101/WA/4236:4240,
1/WA/4294:4296,
1/WA/4323:4324,
1/WA/4333:4335
No text annotation
J4_8VVT_0111/WA/4592:4595,
1/WA/4625:4626,
1/WA/4681:4683,
1/WA/4717:4720
No text annotation
J4_8VVT_0121/ZA/98:106,
1/ZA/355:357,
1/ZA/405:409,
1/ZA/431:432
No text annotation
J4_8VVT_0131/ZA/671:673,
1/ZA/1032:1037,
1/ZA/1078:1089,
1/ZA/1160:1161
No text annotation
J5_8VVT_0011/WA/19:21,
1/YA/35:42,
1/YA/101:106,
1/YA/113:114,
1/YA/136:138
No text annotation
J5_8VVT_0021/WA/1341:1346,
1/WA/1521:1524,
1/WA/1663:1666,
1/WA/2293:2295,
1/WA/2350:2356
No text annotation
J5_8VVT_0031/WA/2860:2868,
1/WA/2892:2893,
1/WA/3618:3619,
1/WA/3623:3631,
1/WA/3840:3842
No text annotation
J5_8VVT_0041/WA/3908:3915,
1/WA/4397:4405,
1/WA/4449:4458,
1/WA/4533:4539,
1/WA/4557:4562
No text annotation
J5_8VVT_0051/WA/3925:3928,
1/WA/4193:4196,
1/WA/4209:4210,
1/WA/4232:4233,
1/WA/4380:4386
No text annotation
J5_8VVT_0061/ZA/30:34,
1/ZA/521:527,
1/ZA/558:563,
1/ZA/592:595,
1/ZA/641:644
No text annotation
J5_8VVT_0071/ZA/30:34,
1/ZA/521:527,
1/ZA/558:565,
1/ZA/585:595,
1/ZA/641:644
No text annotation
J5_8VVT_0081/ZA/53:56,
1/ZA/89:96,
1/ZA/434:436,
1/ZA/457:459,
1/ZA/470:474
No text annotation
J5_8VVT_0091/ZA/123:129,
1/ZA/183:185,
1/ZA/214:215,
1/ZA/310:312,
1/ZA/337:341
No text annotation
J6_8VVT_0011/WA/21:26,
1/WA/57:67,
1/WA/74:78,
1/WA/105:109,
1/WA/332:339,
1/YA/33:35
No text annotation
J6_8VVT_0021/WA/1358:1361,
1/WA/1390:1394,
1/WA/1401:1405,
1/WA/1424:1427,
1/WA/1469:1471,
1/WA/1504:1509
No text annotation
J6_8VVT_0031/WA/3925:3928,
1/WA/4193:4196,
1/WA/4209:4210,
1/WA/4232:4235,
1/WA/4336:4347,
1/WA/4375:4386
No text annotation
J7_8VVT_0011/WA/1671:1676,
1/WA/1689:1690,
1/WA/1857:1860,
1/WA/1884:1889,
1/WA/1900:1904,
1/WA/2082:2083,
1/WA/2283:2288
No text annotation

Problematic loops

No problematic loops


Coloring options:
Copyright 2025 BGSU RNA group. Page generated in 0.0739 s