HL_8VVT_004

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGCGGCG

Length

7 nucleotides

Bulged bases

8VVT|1|WA|G|134, 8VVT|1|WA|G|135, 8VVT|1|WA|C|136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|WA|C|131
8VVT|1|WA|G|132
8VVT|1|WA|C|133
8VVT|1|WA|G|134
8VVT|1|WA|G|135
8VVT|1|WA|C|136
8VVT|1|WA|G|137

Current chains

Chain WA

28S rRNA

Nearby chains

Chain GA

uL29

Chain IA

L37

Chain M

L15

Chain YA

5.8S ribosomal RNA; 5.8S rRNA