HL_8VVT_018

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCUUCCAGUCCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|WA|C|1442
8VVT|1|WA|C|1443
8VVT|1|WA|U|1444
8VVT|1|WA|U|1445
8VVT|1|WA|C|1446
8VVT|1|WA|C|1447
8VVT|1|WA|A|1448
8VVT|1|WA|G|1449
8VVT|1|WA|U|1450
8VVT|1|WA|C|1451
8VVT|1|WA|C|1452
8VVT|1|WA|G|1453

Current chains

Chain WA

28S rRNA

Nearby chains

Chain AA

eL29

Chain C

uL4

Chain F

uL30

Chain P

eL18