HL_8VVT_029
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UGUAACAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VVT_029 not in the Motif Atlas
- Geometric match to HL_8CRE_027
- Geometric discrepancy: 0.2419
- The information below is about HL_8CRE_027
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
8VVT|1|WA|U|2011
8VVT|1|WA|G|2012
8VVT|1|WA|U|2013
8VVT|1|WA|A|2014
8VVT|1|WA|A|2015
8VVT|1|WA|C|2016
8VVT|1|WA|A|2017
8VVT|1|WA|A|2018
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain LA
- eL40
- Chain QA
- uL10
- Chain RA
- uL3
- Chain v
- eukaryotic elongation factor 2
Coloring options: