HL_8VVT_030
3D structure
- PDB id
- 8VVT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian ribosomes bound to Anisomycin in the rotated conformation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAGUCGGCAGAGCGAGAAAGAGAGUGGCGCGGACGCUACG
- Length
- 40 nucleotides
- Bulged bases
- 8VVT|1|WA|C|2099, 8VVT|1|WA|C|2265, 8VVT|1|WA|C|2271, 8VVT|1|WA|U|2272, 8VVT|1|WA|C|2274
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVT|1|WA|C|2092
8VVT|1|WA|A|2093
8VVT|1|WA|G|2094
8VVT|1|WA|U|2095
8VVT|1|WA|C|2096
8VVT|1|WA|G|2097
8VVT|1|WA|G|2098
8VVT|1|WA|C|2099
8VVT|1|WA|A|2100
8VVT|1|WA|G|2101
8VVT|1|WA|A|2102
8VVT|1|WA|G|2103
8VVT|1|WA|C|2104
8VVT|1|WA|G|2105
8VVT|1|WA|A|2106
8VVT|1|WA|G|2107
8VVT|1|WA|A|2108
8VVT|1|WA|A|2109
8VVT|1|WA|A|2110
8VVT|1|WA|G|2111
8VVT|1|WA|A|2112
8VVT|1|WA|G|2113
8VVT|1|WA|A|2114
8VVT|1|WA|G|2115
8VVT|1|WA|U|2116
8VVT|1|WA|G|2117
8VVT|1|WA|G|2118
8VVT|1|WA|C|2263
8VVT|1|WA|G|2264
8VVT|1|WA|C|2265
8VVT|1|WA|G|2266
8VVT|1|WA|G|2267
8VVT|1|WA|A|2268
8VVT|1|WA|C|2269
8VVT|1|WA|G|2270
8VVT|1|WA|C|2271
8VVT|1|WA|U|2272
8VVT|1|WA|A|2273
8VVT|1|WA|C|2274
8VVT|1|WA|G|2275
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain AA
- eL29
- Chain C
- uL4
- Chain DA
- eL32
- Chain E
- L6
- Chain F
- uL30
- Chain P
- eL18
- Chain PA
- eL28
Coloring options: