HL_8VVT_089

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUCCACUUUAAAUCCUUUAAC

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|ZA|G|565
8VVT|1|ZA|U|566
8VVT|1|ZA|C|567
8VVT|1|ZA|C|568
8VVT|1|ZA|A|569
8VVT|1|ZA|C|570
8VVT|1|ZA|U|571
8VVT|1|ZA|U|572
8VVT|1|ZA|U|573
8VVT|1|ZA|A|574
8VVT|1|ZA|A|575
8VVT|1|ZA|A|576
8VVT|1|ZA|U|577
8VVT|1|ZA|C|578
8VVT|1|ZA|C|579
8VVT|1|ZA|U|580
8VVT|1|ZA|U|581
8VVT|1|ZA|U|582
8VVT|1|ZA|A|583
8VVT|1|ZA|A|584
8VVT|1|ZA|C|585

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain EB

eS4

Chain JB

S9

Chain YB

eS24