HL_8VVT_092

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

8VVT|1|ZA|U|890, 8VVT|1|ZA|G|891

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|ZA|U|885
8VVT|1|ZA|A|886
8VVT|1|ZA|U|887
8VVT|1|ZA|U|888
8VVT|1|ZA|U|889
8VVT|1|ZA|U|890
8VVT|1|ZA|G|891
8VVT|1|ZA|U|892
8VVT|1|ZA|U|893
8VVT|1|ZA|G|894
8VVT|1|ZA|G|895
8VVT|1|ZA|U|896
8VVT|1|ZA|U|897
8VVT|1|ZA|U|898
8VVT|1|ZA|U|899
8VVT|1|ZA|C|900
8VVT|1|ZA|G|901

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain GB

S6