HL_8VVT_105

3D structure

PDB id

8VVT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian ribosomes bound to Anisomycin in the rotated conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUGCAAUUAUU

Length

12 nucleotides

Bulged bases

8VVT|1|ZA|U|1621, 8VVT|1|ZA|U|1622, 8VVT|1|ZA|A|1623

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVT|1|ZA|A|1614
8VVT|1|ZA|U|1615
8VVT|1|ZA|U|1616
8VVT|1|ZA|G|1617
8VVT|1|ZA|C|1618
8VVT|1|ZA|A|1619
8VVT|1|ZA|A|1620
8VVT|1|ZA|U|1621
8VVT|1|ZA|U|1622
8VVT|1|ZA|A|1623
8VVT|1|ZA|U|1624
8VVT|1|ZA|U|1625

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain DC

uS14

Chain PB

uS19

Chain SB

uS13

Chain TB

eS19