HL_8VVU_016

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GUGUGAGGC

Length

9 nucleotides

Bulged bases

8VVU|1|WA|G|232

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|WA|G|230
8VVU|1|WA|U|231
8VVU|1|WA|G|232
8VVU|1|WA|U|233
8VVU|1|WA|G|234
8VVU|1|WA|A|235
8VVU|1|WA|G|236
8VVU|1|WA|G|237
8VVU|1|WA|C|238

Current chains

Chain WA

28S rRNA

Nearby chains

Chain C

uL4

Chain X

L26

Chain YA

5.8S ribosomal RNA; 5.8S rRNA