HL_8VVU_021

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CGAGACCCG

Length

9 nucleotides

Bulged bases

8VVU|1|WA|A|971, 8VVU|1|WA|C|972

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|WA|C|967
8VVU|1|WA|G|968
8VVU|1|WA|A|969
8VVU|1|WA|G|970
8VVU|1|WA|A|971
8VVU|1|WA|C|972
8VVU|1|WA|C|973
8VVU|1|WA|C|974
8VVU|1|WA|G|975

Current chains

Chain WA

28S rRNA

Nearby chains

Chain C

uL4

Chain E

L6

Chain F

uL30