HL_8VVU_027

3D structure

PDB id

8VVU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Anisomycin-bound mammalian ribosome with partially accommodated A-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCUUCCAGUCCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVU|1|WA|C|1438
8VVU|1|WA|C|1439
8VVU|1|WA|U|1440
8VVU|1|WA|U|1442
8VVU|1|WA|C|1443
8VVU|1|WA|C|1444
8VVU|1|WA|A|1445
8VVU|1|WA|G|1446
8VVU|1|WA|U|1447
8VVU|1|WA|C|1448
8VVU|1|WA|C|1449
8VVU|1|WA|G|1450

Current chains

Chain WA

28S rRNA

Nearby chains

Chain AA

L29

Chain C

uL4

Chain F

uL30

Chain P

eL18